diff --git a/oldMcode/compare.m b/oldMcode/compare.m new file mode 100644 index 0000000..3383e9b --- /dev/null +++ b/oldMcode/compare.m @@ -0,0 +1,26 @@ +maxSize=6; + +mseErrorAutoenc=zeros([maxSize,1]); +for i=1:maxSize + ae=trainAutoencoder(trainingData,i,'ShowProgressWindow',false); + predicted=predict(ae,trainingData); + mseErrorAutoenc(i)=mse(trainingData-predicted); +end + +fig=figure(); +subplot(1,3,1); +plot(mseErrorAutoenc) + +%PCA +[COEFF,SCORE,latent] = princomp(trainingData); +subplot(1,3,2); +plot(cumsum(latent)./sum(latent)) + +%NNMF +D=cell(maxSize,1); +for i=1:maxSize + [W,H,D{i}]=nnmf(trainingData,i); +end + +subplot(1,3,3); +plot(diff(cell2mat(D))) \ No newline at end of file diff --git a/oldMcode/determineSizeOfHiddenLayer.m b/oldMcode/determineSizeOfHiddenLayer.m deleted file mode 100644 index f90fc51..0000000 --- a/oldMcode/determineSizeOfHiddenLayer.m +++ /dev/null @@ -1,8 +0,0 @@ -maxSize=10; - -mseError=zeros([maxSize,1]); -for i=1:maxSize - ae=trainAutoencoder(trainingData,i,'ShowProgressWindow',false); - predicted=predict(ae,trainingData); - mseError(i)=mse(trainingData-predicted); -end \ No newline at end of file diff --git a/papers/2006-tresch-nnmf-for-synergies.pdf b/papers/2006-tresch-nnmf-for-synergies.pdf new file mode 100644 index 0000000..5c699c7 --- /dev/null +++ b/papers/2006-tresch-nnmf-for-synergies.pdf Binary files differ diff --git a/plots/autoencHiddenLayerSize.fig b/plots/autoencHiddenLayerSize.fig new file mode 100644 index 0000000..408e393 --- /dev/null +++ b/plots/autoencHiddenLayerSize.fig Binary files differ diff --git a/text/TODO.txt b/text/TODO.txt index 594b2bb..b65e320 100644 --- a/text/TODO.txt +++ b/text/TODO.txt @@ -17,7 +17,7 @@ ohne gridsearch vergleichen mit gridsearch Synergien: Autoenconder, NNMF (non-negative Matrix-Factorisation), PCA -Größenordnung 2-3 ? +Größenordnung 2-3 (-> 3) Tresch, Matrix Fact. 2006 diff --git a/text/collection.txt b/text/collection.txt index bab3a9c..af63b90 100644 --- a/text/collection.txt +++ b/text/collection.txt @@ -28,3 +28,5 @@ ----- correlation for Position instead of movement (one day) EMG: 0.2982,0.2757,0.1178 +all days & subjects: +EMG: 0.1851,0.2115,0.1227 EEG: 0.3795,0.3756,0.3411